PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0094s0037.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 309aa    MW: 34068.6 Da    PI: 5.8267
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0094s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.3e-20156206255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdps++g  +r++lg+f+ta +Aaka+++a+ kl+g
  Kalax.0094s0037.1.p 156 HYRGVRRRP-WGKFAAEIRDPSKRG--ARVWLGTFDTAIDAAKAYDRAAFKLRG 206
                          7********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.5E-32155215IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-22156216IPR016177DNA-binding domain
PROSITE profilePS5103224.46156214IPR001471AP2/ERF domain
PfamPF008471.1E-13156206IPR001471AP2/ERF domain
CDDcd000186.35E-31156214No hitNo description
SMARTSM003801.3E-37156220IPR001471AP2/ERF domain
PRINTSPR003671.7E-13157168IPR001471AP2/ERF domain
PRINTSPR003671.7E-13196216IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MATPSEVSTL EQIKQHLFGG LLSPVNLKPL GSGSDSSESA VTTSTDSPVS FSNYGAFSKL  60
ESCRSFEFDH LPNEFFSFET KFETTEFDFA PKAEVIDRIE ISKKPQILTS KPSRKPSLNI  120
SLPSKTERLD LTQPPAAPAA VVVSMPEKAD LSDDRHYRGV RRRPWGKFAA EIRDPSKRGA  180
RVWLGTFDTA IDAAKAYDRA AFKLRGSKAI LNFPLEIAES CYAGAVAEVS DCGRKRRRQE  240
EGVEIEAKKV KAEEVVVEEE MAKPPLTPTS WTAFWDFDET EMRGIFNVPP LSPLSPHPAL  300
GFPQLSVL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A4e-31155217466ATERF1
2gcc_A4e-31155217466ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233237RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012070058.18e-70PREDICTED: ethylene-responsive transcription factor 5-like
TrEMBLA0A067L5Z59e-70A0A067L5Z5_JATCU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-36ERF family protein